Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Gm10232-201ENSMUST00000089221 720 ntBASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9n-2A0A0G2JDP3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9n-2A0A0G2JDP3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms