Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav11A0A0B4J1J9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav11A0A0B4J1J9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav11A0A0B4J1J9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav11A0A0B4J1J9 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Gm11687-201ENSMUST00000118911 886 ntBASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav11A0A0B4J1J9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.01□□□□□ -0.17
Trav11A0A0B4J1J9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav11A0A0B4J1J9 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav11A0A0B4J1J9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms