Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv16A0A0B4J1H3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv16A0A0B4J1H3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm10420-201ENSMUST00000121713 882 ntBASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv16A0A0B4J1H3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv16A0A0B4J1H3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv16A0A0B4J1H3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv16A0A0B4J1H3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv16A0A0B4J1H3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv16A0A0B4J1H3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm11175-201ENSMUST00000116172 543 ntBASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv16A0A0B4J1H3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv16A0A0B4J1H3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms