Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms