Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv6-4A0A0A6YX19 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv6-4A0A0A6YX19 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ighv6-4A0A0A6YX19 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Gm8503-201ENSMUST00000118131 455 ntBASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ighv6-4A0A0A6YX19 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv6-4A0A0A6YX19 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv6-4A0A0A6YX19 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv6-4A0A0A6YX19 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ighv6-4A0A0A6YX19 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv6-4A0A0A6YX19 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv6-4A0A0A6YX19 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms