Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav21-dv12A0A075B6C4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav21-dv12A0A075B6C4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav21-dv12A0A075B6C4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav21-dv12A0A075B6C4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav21-dv12A0A075B6C4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Trav21-dv12A0A075B6C4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav21-dv12A0A075B6C4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm5921-201ENSMUST00000075898 882 ntBASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav21-dv12A0A075B6C4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav21-dv12A0A075B6C4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav21-dv12A0A075B6C4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms