Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-4A0A075B6B4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-4A0A075B6B4 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Gm12504-201ENSMUST00000120860 2231 ntBASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-4A0A075B6B4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-4A0A075B6B4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-4A0A075B6B4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-4A0A075B6B4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-4A0A075B6B4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-4A0A075B6B4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Gm45102-201ENSMUST00000207427 857 ntBASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-4A0A075B6B4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6-4A0A075B6B4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 Gm14117-201ENSMUST00000122417 843 ntBASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.77■□□□□ 0.12
Trav6-4A0A075B6B4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-4A0A075B6B4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-4A0A075B6B4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav6-4A0A075B6B4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-4A0A075B6B4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-4A0A075B6B4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-4A0A075B6B4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms