Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6n-6A0A075B6B2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6n-6A0A075B6B2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.15■□□□□ 0.02
Trav6n-6A0A075B6B2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6n-6A0A075B6B2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6n-6A0A075B6B2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6n-6A0A075B6B2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav6n-6A0A075B6B2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6n-6A0A075B6B2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms