Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav5-4A0A075B652 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav5-4A0A075B652 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav5-4A0A075B652 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav5-4A0A075B652 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav5-4A0A075B652 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav5-4A0A075B652 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav5-4A0A075B652 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Gm5921-201ENSMUST00000075898 882 ntBASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.01■□□□□ 0.31
Trav5-4A0A075B652 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav5-4A0A075B652 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Gm13238-201ENSMUST00000117655 780 ntBASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav5-4A0A075B652 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav5-4A0A075B652 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms