Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Golph3-202ENSMUST00000226517 2359 ntBASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15-2-dv6-2A0A075B650 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15-2-dv6-2A0A075B650 Gm27502-201ENSMUST00000183495 199 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms