Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Gm7432-201ENSMUST00000210343 879 ntBASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-2A0A075B638 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-2A0A075B638 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Gm11599-201ENSMUST00000118720 878 ntBASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-2A0A075B638 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-2A0A075B638 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav4-2A0A075B638 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-2A0A075B638 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4-2A0A075B638 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav4-2A0A075B638 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4-2A0A075B638 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-2A0A075B638 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav4-2A0A075B638 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-2A0A075B638 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-2A0A075B638 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav4-2A0A075B638 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms