Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4n-4A0A075B615 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.27□□□□□ -0.12
Trav4n-4A0A075B615 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav4n-4A0A075B615 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4n-4A0A075B615 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Gm9397-201ENSMUST00000200125 605 ntBASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4n-4A0A075B615 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav4n-4A0A075B615 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4n-4A0A075B615 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.22□□□□□ -0.13
Trav4n-4A0A075B615 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4n-4A0A075B615 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav4n-4A0A075B615 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4n-4A0A075B615 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4n-4A0A075B615 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms