Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-55A0A075B5W6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-55A0A075B5W6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-55A0A075B5W6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-55A0A075B5W6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-55A0A075B5W6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ighv1-55A0A075B5W6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Etf1-202ENSMUST00000180351 108 ntBASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ighv1-55A0A075B5W6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-55A0A075B5W6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-55A0A075B5W6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Gm9959-201ENSMUST00000068277 390 ntBASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-55A0A075B5W6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms