Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm17931-201ENSMUST00000208132 634 ntBASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm45224-201ENSMUST00000208203 414 ntBASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
ClcnkaQ9WUB7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm5419-201ENSMUST00000119301 527 ntBASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm26361-201ENSMUST00000158868 186 ntBASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ClcnkaQ9WUB7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
ClcnkaQ9WUB7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.67
ClcnkaQ9WUB7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ClcnkaQ9WUB7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
ClcnkaQ9WUB7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
ClcnkaQ9WUB7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms