Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf40aQ9R1C7 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm12036-201ENSMUST00000120008 530 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm38241-201ENSMUST00000192641 898 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm4857-201ENSMUST00000192718 785 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm43962-201ENSMUST00000203898 190 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.03□□□□□ -0.32
Prpf40aQ9R1C7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf40aQ9R1C7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm11511-201ENSMUST00000118146 540 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm45878-201ENSMUST00000211839 241 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.02□□□□□ -0.33
Prpf40aQ9R1C7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf40aQ9R1C7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf40aQ9R1C7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf40aQ9R1C7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf40aQ9R1C7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf40aQ9R1C7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms