Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn11aQ9R053 Gm23255-201ENSMUST00000102244 110 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm9673-201ENSMUST00000119287 781 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm5700-201ENSMUST00000191483 989 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm18514-201ENSMUST00000218980 436 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.77□□□□□ -0.21
Scn11aQ9R053 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn11aQ9R053 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm25053-201ENSMUST00000103982 133 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm25922-201ENSMUST00000104281 130 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm13286-201ENSMUST00000117750 537 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm15329-201ENSMUST00000121408 155 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm24679-201ENSMUST00000158762 111 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm18801-201ENSMUST00000186616 536 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm25053-202ENSMUST00000199731 132 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm12906-201ENSMUST00000154610 441 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm25554-201ENSMUST00000158075 113 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Gm43966-201ENSMUST00000203301 612 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Mir326-201ENSMUST00000083637 95 ntBASIC13.76□□□□□ -0.21
Scn11aQ9R053 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn11aQ9R053 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn11aQ9R053 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Scn11aQ9R053 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn11aQ9R053 Btrc-209ENSMUST00000224478 2194 ntBASIC13.75□□□□□ -0.21
Scn11aQ9R053 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn11aQ9R053 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.75□□□□□ -0.21
Scn11aQ9R053 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn11aQ9R053 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms