Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Gm21811-201ENSMUST00000096485 930 ntBASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ldb3Q9JKS4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm12217-201ENSMUST00000118858 696 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm12501-201ENSMUST00000119163 529 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm2965-201ENSMUST00000198365 343 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Rps4l-202ENSMUST00000204242 789 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm5363-201ENSMUST00000211927 938 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Gm7940-201ENSMUST00000218195 769 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ldb3Q9JKS4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm25732-201ENSMUST00000175168 60 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm8100-201ENSMUST00000182906 988 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm5714-201ENSMUST00000197343 566 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 Gm45575-201ENSMUST00000210283 548 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.67□□□□□ -0.7
Ldb3Q9JKS4 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms