Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm11814-201ENSMUST00000119515 929 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm12036-201ENSMUST00000120008 530 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm11637-201ENSMUST00000120601 592 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm13123-201ENSMUST00000122173 492 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm9794-201ENSMUST00000202370 423 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Gm10012-201ENSMUST00000078252 192 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ube4bQ9ES00 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm8805-201ENSMUST00000117848 313 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm11803-201ENSMUST00000119966 444 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm2231-201ENSMUST00000125661 612 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm24196-201ENSMUST00000179161 110 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm24136-201ENSMUST00000083374 165 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ube4bQ9ES00 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms