Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-4Q9EQM3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm12906-201ENSMUST00000154610 441 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23675-201ENSMUST00000157311 125 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm37365-201ENSMUST00000193109 409 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-4Q9EQM3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-4Q9EQM3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm12337-201ENSMUST00000119634 400 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14395-201ENSMUST00000120494 563 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Mir1905-201ENSMUST00000122779 82 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm7985-201ENSMUST00000183329 981 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm17825-201ENSMUST00000206836 794 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Gm26670-202ENSMUST00000226862 340 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.08□□□□□ -0.48
Nkx2-4Q9EQM3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx2-4Q9EQM3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms