Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Gm37458-201ENSMUST00000194055 410 ntBASIC11.57□□□□□ -0.56
Rrp8Q9DB85 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Gm9139-201ENSMUST00000218817 700 ntBASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rrp8Q9DB85 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm28937-201ENSMUST00000185413 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm29400-201ENSMUST00000187208 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm28662-201ENSMUST00000188446 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm28251-201ENSMUST00000188835 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm37318-201ENSMUST00000194325 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm38017-201ENSMUST00000194768 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm37287-201ENSMUST00000195449 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm37793-201ENSMUST00000195548 695 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm8574-201ENSMUST00000203207 924 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm44158-201ENSMUST00000203881 505 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm8342-201ENSMUST00000209839 757 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm5451-201ENSMUST00000080545 579 ntBASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rrp8Q9DB85 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rrp8Q9DB85 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms