Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm27530-201ENSMUST00000184096 98 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm37466-201ENSMUST00000195692 652 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Rps4l-202ENSMUST00000204242 789 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm23596-201ENSMUST00000104304 132 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm15004-201ENSMUST00000119192 630 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm27552-201ENSMUST00000183351 62 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm27844-201ENSMUST00000183613 62 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm19287-201ENSMUST00000203190 358 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm9797-202ENSMUST00000218003 294 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm5705-201ENSMUST00000066241 711 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2aQ9DB34 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2aQ9DB34 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms