Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp4bQ9D8B3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm26047-201ENSMUST00000157308 113 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Mir7677-201ENSMUST00000184226 67 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm26047-202ENSMUST00000198840 115 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm6450-201ENSMUST00000200896 574 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Rps4l-202ENSMUST00000204242 789 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.87□□□□□ -0.03
Chmp4bQ9D8B3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm7584-201ENSMUST00000175829 940 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm45433-201ENSMUST00000209386 247 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm8913-201ENSMUST00000209491 641 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm6082-201ENSMUST00000215204 454 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm270-201ENSMUST00000223010 976 ntBASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp4bQ9D8B3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Gm17376-201ENSMUST00000166016 84 ntBASIC14.85□□□□□ -0.03
Chmp4bQ9D8B3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms