Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm45199-201ENSMUST00000207640 1507 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Mir1943-201ENSMUST00000158276 73 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm9540-201ENSMUST00000188230 478 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm5982-201ENSMUST00000196234 512 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.48■□□□□ 0.07
U2af1Q9D883 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
U2af1Q9D883 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
U2af1Q9D883 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.48■□□□□ 0.07
U2af1Q9D883 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Gm43075-201ENSMUST00000198613 3905 ntBASIC15.47■□□□□ 0.07
U2af1Q9D883 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Gm15573-201ENSMUST00000119487 540 ntBASIC15.47■□□□□ 0.07
U2af1Q9D883 Gm11956-201ENSMUST00000119525 512 ntBASIC15.47■□□□□ 0.07
U2af1Q9D883 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Gm22144-201ENSMUST00000157402 102 ntBASIC15.47■□□□□ 0.07
U2af1Q9D883 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
U2af1Q9D883 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
U2af1Q9D883 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.47■□□□□ 0.07
U2af1Q9D883 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
U2af1Q9D883 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
U2af1Q9D883 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm14193-201ENSMUST00000105067 153 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm7666-201ENSMUST00000146631 819 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm35960-201ENSMUST00000202712 767 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.46■□□□□ 0.07
U2af1Q9D883 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.46■□□□□ 0.07
U2af1Q9D883 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
U2af1Q9D883 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
U2af1Q9D883 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms