Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3a3Q9D554 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm11637-201ENSMUST00000120601 592 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm10156-201ENSMUST00000122364 462 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm37497-201ENSMUST00000195830 798 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gm8463-201ENSMUST00000208573 613 ntBASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3a3Q9D554 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm22058-201ENSMUST00000083393 310 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm8420-201ENSMUST00000097103 598 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sf3a3Q9D554 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sf3a3Q9D554 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms