Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Gm5904-201ENSMUST00000210286 865 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim42Q9D2H5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm18018-201ENSMUST00000198273 408 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm10076-201ENSMUST00000073238 384 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim42Q9D2H5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim42Q9D2H5 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms