Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm13665-201ENSMUST00000120830 528 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm25668-201ENSMUST00000157700 129 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm25890-201ENSMUST00000177643 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm22614-201ENSMUST00000178300 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm38241-201ENSMUST00000192641 898 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm43962-201ENSMUST00000203898 190 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm22042-201ENSMUST00000082989 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm26110-201ENSMUST00000083971 165 ntBASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Khdc3Q9CWU5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Khdc3Q9CWU5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc3Q9CWU5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms