Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc3Q9CW03 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc3Q9CW03 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smc3Q9CW03 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc3Q9CW03 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc3Q9CW03 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc3Q9CW03 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smc3Q9CW03 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm11222-201ENSMUST00000119005 738 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm11960-201ENSMUST00000122068 925 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm31256-201ENSMUST00000194705 506 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm4607-201ENSMUST00000206649 577 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm25857-201ENSMUST00000082788 129 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.83□□□□□ -0.2
Smc3Q9CW03 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc3Q9CW03 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm6963-201ENSMUST00000147879 379 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm17420-201ENSMUST00000164753 153 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 AY702102-202ENSMUST00000194651 1173 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm38314-201ENSMUST00000195709 625 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm19287-201ENSMUST00000203190 358 ntBASIC13.82□□□□□ -0.2
Smc3Q9CW03 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc3Q9CW03 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms