Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm8872-201ENSMUST00000197475 1341 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.27□□□□□ -0.6
Otud1Q9CUB6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Otud1Q9CUB6 AC136019.1-201ENSMUST00000226503 1412 ntBASIC11.27□□□□□ -0.6
Otud1Q9CUB6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Otud1Q9CUB6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Otud1Q9CUB6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Otud1Q9CUB6 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm4310-201ENSMUST00000177847 889 ntBASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm19353-201ENSMUST00000184561 445 ntBASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm43452-201ENSMUST00000201873 991 ntBASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm28359-201ENSMUST00000187470 1322 ntBASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Otud1Q9CUB6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm8566-201ENSMUST00000120174 465 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm8100-201ENSMUST00000182906 988 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm27390-201ENSMUST00000184516 176 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm42516-201ENSMUST00000198691 767 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm4482-201ENSMUST00000200876 742 ntBASIC11.26□□□□□ -0.61
Otud1Q9CUB6 Gm6681-201ENSMUST00000205215 607 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms