Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Rgr-203ENSMUST00000225070 4704 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm13570-201ENSMUST00000140763 309 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm18062-201ENSMUST00000208020 547 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm18055-201ENSMUST00000208254 547 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm39404-201ENSMUST00000216350 313 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm8420-201ENSMUST00000097103 598 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ska1Q9CPV1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm24934-201ENSMUST00000103764 111 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Mospd4-201ENSMUST00000180618 576 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm42627-201ENSMUST00000197347 224 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm43133-201ENSMUST00000197472 463 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ska1Q9CPV1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Ska1Q9CPV1 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms