Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.82□□□□□ -0.52
Trim33Q99PP7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim33Q99PP7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Mir877-201ENSMUST00000104738 85 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm7722-201ENSMUST00000120646 741 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm26361-201ENSMUST00000158868 186 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm42599-201ENSMUST00000201308 469 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.81□□□□□ -0.52
Trim33Q99PP7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim33Q99PP7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.8□□□□□ -0.52
Trim33Q99PP7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm24541-201ENSMUST00000103871 96 ntBASIC11.8□□□□□ -0.52
Trim33Q99PP7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm38241-201ENSMUST00000192641 898 ntBASIC11.8□□□□□ -0.52
Trim33Q99PP7 Gm4857-201ENSMUST00000192718 785 ntBASIC11.8□□□□□ -0.52
Trim33Q99PP7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim33Q99PP7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms