Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd1Q99MH6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd1Q99MH6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkd1Q99MH6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkd1Q99MH6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm23931-201ENSMUST00000103842 109 ntBASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm25214-201ENSMUST00000104573 129 ntBASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm10312-201ENSMUST00000078515 489 ntBASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkd1Q99MH6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm11793-201ENSMUST00000120433 981 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm29396-201ENSMUST00000185659 716 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm6013-201ENSMUST00000212264 699 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm19994-201ENSMUST00000217086 586 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm7046-201ENSMUST00000221351 977 ntBASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkd1Q99MH6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms