Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm44100-201ENSMUST00000204329 436 ntBASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Gm2553-201ENSMUST00000215986 605 ntBASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.69□□□□□ -0.38
Tlr3Q99MB1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm24749-201ENSMUST00000157838 343 ntBASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm28071-201ENSMUST00000190355 478 ntBASIC12.68□□□□□ -0.38
Tlr3Q99MB1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tlr3Q99MB1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm23949-201ENSMUST00000104027 127 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm11700-201ENSMUST00000119409 403 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm9550-201ENSMUST00000161130 862 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm17040-202ENSMUST00000170597 889 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Mir7677-201ENSMUST00000184226 67 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm18038-201ENSMUST00000197900 485 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm270-201ENSMUST00000223010 976 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tlr3Q99MB1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms