Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm14109-201ENSMUST00000118814 309 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Rprl1-201ENSMUST00000158050 327 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm44651-201ENSMUST00000207343 372 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm6082-201ENSMUST00000215204 454 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm9257-201ENSMUST00000221254 232 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp1b1Q99LU0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chmp1b1Q99LU0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp1b1Q99LU0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms