Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdk5rap3Q99LM2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11960-201ENSMUST00000122068 925 ntBASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Gm8062-201ENSMUST00000139696 444 ntBASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Gm38314-201ENSMUST00000195709 625 ntBASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cdk5rap3Q99LM2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gm27572-201ENSMUST00000183702 255 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gm3096-201ENSMUST00000185770 364 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gm19287-201ENSMUST00000203190 358 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdk5rap3Q99LM2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms