Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.54□□□□□ -0.08
RtcbQ99LF4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RtcbQ99LF4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm4294-201ENSMUST00000105169 614 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm12036-201ENSMUST00000120008 530 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm16219-201ENSMUST00000120096 274 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm25492-201ENSMUST00000157383 129 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Mir6941-201ENSMUST00000184711 59 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm43610-201ENSMUST00000199117 365 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm29763-201ENSMUST00000205306 616 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 BC106175-202ENSMUST00000219344 1213 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.53□□□□□ -0.08
RtcbQ99LF4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RtcbQ99LF4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.52□□□□□ -0.08
RtcbQ99LF4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.52□□□□□ -0.08
RtcbQ99LF4 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.52□□□□□ -0.08
RtcbQ99LF4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RtcbQ99LF4 Gm15329-201ENSMUST00000121408 155 ntBASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.52□□□□□ -0.09
RtcbQ99LF4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RtcbQ99LF4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RtcbQ99LF4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms