Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm12957-201ENSMUST00000117835 377 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.89□□□□□ -0.51
Cdk9Q99J95 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk9Q99J95 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Gm23912-201ENSMUST00000104687 87 ntBASIC11.88□□□□□ -0.51
Cdk9Q99J95 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Gm12502-201ENSMUST00000120197 444 ntBASIC11.88□□□□□ -0.51
Cdk9Q99J95 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.88□□□□□ -0.51
Cdk9Q99J95 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Gm10076-201ENSMUST00000073238 384 ntBASIC11.88□□□□□ -0.51
Cdk9Q99J95 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.88□□□□□ -0.51
Cdk9Q99J95 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdk9Q99J95 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdk9Q99J95 Gm27682-201ENSMUST00000183930 110 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.87□□□□□ -0.51
Cdk9Q99J95 Gm5781-201ENSMUST00000219792 443 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 353.5 ms