Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm43163-201ENSMUST00000196571 442 ntBASIC18.36■□□□□ 0.53
Clip1Q922J3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm45758-201ENSMUST00000212448 1006 ntBASIC18.36■□□□□ 0.53
Clip1Q922J3 AC129308.3-201ENSMUST00000225652 524 ntBASIC18.36■□□□□ 0.53
Clip1Q922J3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC18.36■□□□□ 0.53
Clip1Q922J3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC18.36■□□□□ 0.53
Clip1Q922J3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clip1Q922J3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clip1Q922J3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Clip1Q922J3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC18.35■□□□□ 0.53
Clip1Q922J3 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clip1Q922J3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC18.35■□□□□ 0.53
Clip1Q922J3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC18.35■□□□□ 0.53
Clip1Q922J3 Gm5805-201ENSMUST00000072779 456 ntBASIC18.35■□□□□ 0.53
Clip1Q922J3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Clip1Q922J3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clip1Q922J3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clip1Q922J3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC18.34■□□□□ 0.53
Clip1Q922J3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm20554-201ENSMUST00000177421 2352 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm25554-201ENSMUST00000158075 113 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm22877-201ENSMUST00000175451 105 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm21778-201ENSMUST00000178779 471 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm5298-201ENSMUST00000201122 892 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm18059-201ENSMUST00000208073 580 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clip1Q922J3 CT009527.1-201ENSMUST00000224205 339 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC18.34■□□□□ 0.53
Clip1Q922J3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC18.34■□□□□ 0.53
Clip1Q922J3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clip1Q922J3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Clip1Q922J3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC18.33■□□□□ 0.53
Clip1Q922J3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Clip1Q922J3 Gm17709-201ENSMUST00000174536 1096 ntBASIC18.33■□□□□ 0.53
Clip1Q922J3 Gm9884-201ENSMUST00000194343 1222 ntBASIC18.33■□□□□ 0.53
Clip1Q922J3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC18.33■□□□□ 0.53
Clip1Q922J3 Gm43380-201ENSMUST00000200421 220 ntBASIC18.33■□□□□ 0.53
Clip1Q922J3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC18.33■□□□□ 0.53
Clip1Q922J3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clip1Q922J3 Gm5468-202ENSMUST00000227851 682 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms