Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm22698-201ENSMUST00000175375 108 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm17771-201ENSMUST00000194477 1147 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 AL672010.1-201ENSMUST00000215182 1246 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 CT009494.1-201ENSMUST00000225121 1213 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44834-201ENSMUST00000206671 1396 ntBASIC12.15□□□□□ -0.46
Pcdhb20Q91XZ9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb20Q91XZ9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb20Q91XZ9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhb20Q91XZ9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb20Q91XZ9 Gm5715-201ENSMUST00000196854 1465 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm14054-201ENSMUST00000120744 704 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm24382-201ENSMUST00000122698 107 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm23059-201ENSMUST00000158978 107 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm2707-201ENSMUST00000188979 714 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 AC167192.1-201ENSMUST00000225908 139 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Gm10015-201ENSMUST00000072570 465 ntBASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
Pcdhb20Q91XZ9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms