Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm45210-201ENSMUST00000206401 1577 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm25653-201ENSMUST00000158473 138 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm45832-201ENSMUST00000212762 1443 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Trbv27-201ENSMUST00000193711 277 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm43761-201ENSMUST00000202132 991 ntBASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb3Q91XZ7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms