Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga12Q91XY7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm5369-201ENSMUST00000217499 588 ntBASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga12Q91XY7 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga12Q91XY7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm24891-201ENSMUST00000104391 136 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm11663-201ENSMUST00000117888 290 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm15004-201ENSMUST00000119192 630 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm8100-201ENSMUST00000182906 988 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm2553-201ENSMUST00000215986 605 ntBASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdhga12Q91XY7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.26□□□□□ -0.61
Pcdhga12Q91XY7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms