Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm11960-201ENSMUST00000122068 925 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm37424-201ENSMUST00000191727 561 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm38314-201ENSMUST00000195709 625 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm30285-201ENSMUST00000214614 422 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.18□□□□□ -0.46
Trim60Q8VI40 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim60Q8VI40 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.16□□□□□ -0.46
Trim60Q8VI40 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim60Q8VI40 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.16□□□□□ -0.46
Trim60Q8VI40 Olfr284-202ENSMUST00000206647 966 ntBASIC12.16□□□□□ -0.46
Trim60Q8VI40 Gm807-202ENSMUST00000224929 408 ntBASIC12.16□□□□□ -0.46
Trim60Q8VI40 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim60Q8VI40 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms