Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm9996-201ENSMUST00000070359 913 ntBASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nudcd3Q8R1N4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Gm12490-201ENSMUST00000120255 560 ntBASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nudcd3Q8R1N4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms