Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rtn1Q8K0T0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm12857-201ENSMUST00000117678 592 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm13183-201ENSMUST00000118615 789 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm11960-201ENSMUST00000122068 925 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm28450-201ENSMUST00000187349 638 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm29199-201ENSMUST00000187766 775 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm28877-201ENSMUST00000191349 604 ntBASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rtn1Q8K0T0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rtn1Q8K0T0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms