Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfwd3Q8CIK8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm29199-201ENSMUST00000187766 775 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm17827-201ENSMUST00000211825 742 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rfwd3Q8CIK8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gm23949-201ENSMUST00000104027 127 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gm8343-201ENSMUST00000182705 994 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gm28071-201ENSMUST00000190355 478 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.11□□□□□ -0.63
Rfwd3Q8CIK8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms