Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vcpip1Q8CDG3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vcpip1Q8CDG3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vcpip1Q8CDG3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vcpip1Q8CDG3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vcpip1Q8CDG3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms