Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm7150-201ENSMUST00000122032 981 ntBASIC13.73□□□□□ -0.21
Alx1Q8C8B0 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm11956-201ENSMUST00000119525 512 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm10051-201ENSMUST00000145209 414 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm9211-201ENSMUST00000182882 975 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Alx1Q8C8B0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm37986-201ENSMUST00000193285 383 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm17831-201ENSMUST00000205579 900 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Olfr584-201ENSMUST00000098210 964 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Alx1Q8C8B0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.71□□□□□ -0.22
Alx1Q8C8B0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx1Q8C8B0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms