Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gm15207-201ENSMUST00000119259 442 ntBASIC12.97□□□□□ -0.33
Trim9Q8C7M3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim9Q8C7M3 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gm15808-201ENSMUST00000119046 604 ntBASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim9Q8C7M3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim9Q8C7M3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim9Q8C7M3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms