Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc60Q8C4J0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm13461-201ENSMUST00000120980 662 ntBASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm38314-201ENSMUST00000195709 625 ntBASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm19208-201ENSMUST00000213861 912 ntBASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.02■□□□□ -0
Ccdc60Q8C4J0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Ccdc60Q8C4J0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm5714-201ENSMUST00000197343 566 ntBASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm7940-201ENSMUST00000218195 769 ntBASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc60Q8C4J0 Gm13910-201ENSMUST00000121752 1428 ntBASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Gm13347-201ENSMUST00000120298 1353 ntBASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Gm7851-201ENSMUST00000117574 323 ntBASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Gm45113-201ENSMUST00000207518 165 ntBASIC15□□□□□ -0.01
Ccdc60Q8C4J0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc60Q8C4J0 Gm6867-201ENSMUST00000219165 425 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms