Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp44Q8C2S0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp44Q8C2S0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp44Q8C2S0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm13916-201ENSMUST00000117368 628 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm14071-201ENSMUST00000117817 509 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm20495-201ENSMUST00000173902 235 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp44Q8C2S0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Gm8731-201ENSMUST00000118088 412 ntBASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.76□□□□□ -0.21
Usp44Q8C2S0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp44Q8C2S0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm10254-201ENSMUST00000052888 867 ntBASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp44Q8C2S0 Gm8420-201ENSMUST00000097103 598 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms