Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Id2-203ENSMUST00000222667 958 ntBASIC9.69□□□□□ -0.86
Smg1Q8BKX6 CT009550.1-201ENSMUST00000225750 864 ntBASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.69□□□□□ -0.86
Smg1Q8BKX6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm43117-201ENSMUST00000198531 379 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm14165-201ENSMUST00000121456 952 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smg1Q8BKX6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 AC124356.1-201ENSMUST00000221469 698 ntBASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm8873-201ENSMUST00000217847 1439 ntBASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Mir705-201ENSMUST00000102058 82 ntBASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smg1Q8BKX6 Gm12247-201ENSMUST00000117585 670 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms